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April Publications

May 6, 2020

Below is a selection of papers that appeared in April 2020  reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey or Cannon Clusters, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster and MIT’s Engaging Cluster all of which are housed at the MGHPCC.

Erin Arai, Alexandre Tartakovsky, R. Glynn Holt, Sheryl Grace, Emily Ryan (2020), Comparison of Surface Tension Generation Methods in Smoothed Particle Hydrodynamics for Dynamic Systems, Computers and Fluids, doi: 10.1016/j.compfluid.2020.104540
Mehraj R. Awal, Gregory S. Wirak, Christopher V. Gabel, Christopher W. Connor (2020), Collapse of Global Neuronal States in Caenorhabditis elegans under Isoflurane Anesthesia, Anesthesiology doi: 10.1097/ALN.0000000000003304
B.A. Cook, Charlie Conroy, and Pieter van Dokkum (2020), Measuring Star Formation Histories, Distances, and Metallicities with Pixel Color-Magnitude Diagrams II: Applications to nearby elliptical galaxies, arXiv: 2004.10213 [astro-ph.GA]
Jordan M Cox, Bradley Mileson, Ananthan Sadagopan, Steven Lopez (2020), Molecular Recognition and Band Alignment in 3-D Covalent Organic Frameworks for Co-Crystalline Organic Photovoltaics, ChemRxiv, doi: 10.26434/chemrxiv.10792877
Leonard C. Kogos, Yunzhe Li, Jianing Liu, Yuyu Li, Lei Tian & Roberto Paiella (2020), Plasmonic ommatidia for lensless compound-eye vision, Nature Communications. doi: 10.1038/s41467-020-15460-0
Joel Leja, Joshua S. Speagle, Benjamin D. Johnson, Charlie Conroy, Pieter van Dokkum, and Marijn Franx (2020), A New Census of the 0.2 < z < 3.0 Universe. I. The Stellar Mass Function, The Astrophysical Journal, doi; 10.3847/1538-4357/ab7e27
Christopher M. Lemon, Andrew G. Maher, Anthony R. Mazzotti, David C. Powers, Miguel I. Gonzaleza and Daniel G. Nocera (2020), Multielectron C–H photoactivation with an Sb(v) oxo corrole, Chemical Communications, doi: 10.1039/C9CC09892E
Jaclyn Y. Lock, Taylor L. Carlson, Yueyue Yu, Jing Lu, Erika C. Claud & Rebecca L. Carrier (2020), Impact of Developmental Age, Necrotizing Enterocolitis Associated Stress, and Oral Therapeutic Intervention on Mucus Barrier Properties, Scientific Reports, doi: 10.1038/s41598-020-63593-5
T. Patel and D. Tiwari (2020), CLITE: Efficient and QoS-Aware Co-Location of Multiple Latency-Critical Jobs for Warehouse Scale Computers, 2020 IEEE International Symposium on High Performance Computer Architecture (HPCA), San Diego, CA, USA, 2020, doi: 10.1109/HPCA47549.2020.00025
Monica Pengshung, Patrick Neal, Timothy L. Atallah, Junho Kwon, Justin R. Caram, Steven A. Lopez, Ellen M. Sletten (2020), Silicon incorporation in polymethine dyes, The Royal Society of Chemistry via ChemrXiv
Achilleas Pipertzis, George Papamoko, Markus Mühlinghaus, Markus Mezger, Ullrich Scherf, George Floudas (2020), What Determines the Glass Temperature and dc-Conductivity in Imidazolium-Polymerized Ionic Liquids with a Polythiophene Backbone? Macromolecules, doi: 10.1021/acs.macromol.0c00226
Reza Pourhaghighi et al (2020), BraInMap Elucidates the Macromolecular Connectivity Landscape of Mammalian Brain, Cell Systems, doi: 10.1016/j.cels.2020.03.003
Anders W. Sandvik and Bowen Zhao (2020), Consistent scaling exponents at the deconfined quantum-critical point, arXiv: 2003.14305 [ cond-mat.str-el]
Mehmet Gokhan Sensoy, Matthew M. Montemore (2020), A Density Functional Theory Investigation of Oxidation Intermediates on Gold and Gold-Silver Surfaces, J. Phys. Chem. C, doi: 10.1021/acs.jpcc.0c01386
Jack Wisdom (2020), Meteorite transport—Revisited II, Meteoritics and Planetary Science, doi: 10.1111/maps.13463
Xiao Wu, Rachel C. Nethery, M. Benjamin Sabath, Danielle Braun, Francesca Dominici (2020), Exposure to air pollution and COVID-19 mortality in the United States, [pdf]
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

Research projects

Foldit
Dusty With a Chance of Star Formation
Checking the Medicine Cabinet to Interrupt COVID-19 at the Molecular Level
Not Too Hot, Not Too Cold But Still, Is It Just Right?​
Smashing Discoveries​
Microbiome Pattern Hunting
Modeling the Air we Breathe
Exploring Phytoplankton Diversity
The Computer Will See You Now
Computing the Toll of Trapped Diamondback Terrapins
Edging Towards a Greener Future
Physics-driven Drug Discovery
Modeling Plasma-Surface Interactions
Sensing Subduction Zones
Neural Networks & Earthquakes
Small Stars, Smaller Planets, Big Computing
Data Visualization using Climate Reanalyzer
Getting to Grips with Glassy Materials
Modeling Molecular Engines
Forest Mapping: When the Budworms come to Dinner
Exploring Thermoelectric Behavior at the Nanoscale
The Trickiness of Talking to Computers
A Genomic Take on Geobiology
From Grass to Gas
Teaching Computers to Identify Odors
From Games to Brains
The Trouble with Turbulence
A New Twist
A Little Bit of This… A Little Bit of That..
Looking Like an Alien!
Locking Up Computing
Modeling Supernovae
Sound Solution
Lessons in a Virtual Test Tube​
Crack Computing
Automated Real-time Medical Imaging Analysis
Towards a Smarter Greener Grid
Heading Off Head Blight
Organic Light-Harvesting Antennae
Art and AI
Excited by Photons
Tapping into an Ocean of Data
Computing Global Change
Star Power
Engineering the Human Microbiome
Computing Social Capital
Computers Diagnosing Disease
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Collaborative projects

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Outreach & Education Projects

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