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August Publications

September 1, 2020

Below is a selection of papers that appeared in May 2020  reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey or Cannon Clusters, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster and MIT’s Engaging Cluster all of which are housed at the MGHPCC.

Christopher C.M. Baker, Jessica A. Castillo Vardaro, Daniel F. Doak, Johan Pansu, Jérémy Puissant, Robert M. Pringle, Corina E. Tarnita (2020), Spatial patterning of soil microbial communities created by fungus‐farming termites, Molecular Ecology, doi: 10.1111/mec.15585
Tiffany Barnes, Jamie Payton, Nicki Washington, Felesia Stukes, Alan Peterfreund, Sarah Dunton (2020), Featured Research on Equity and Sustained Participation in Engineering, Computing, and Technology, Computing in Science and Engineering, doi: 10.1109/MCSE.2020.3010595
Bodhisatwa Biswas, Seung Gyou Baek, Paul T Bonoli, Syun’ichi Shiraiwa, Greg M Wallace and Anne E White (2020), Study of turbulence-induced refraction of Lower Hybrid waves using synthetic scrape-off layer filaments, Plasma Physics and Controlled Fusion, doi: 10.1088/1361-6587/abb0d5
Paul Z. Hanakata, Ekin D. Cubuk, David K. Campbell, and Harold S. Park (2020), Forward and Inverse Design of Kirigami via Supervised Autoencoder, arXiv:2008.05298 [cond-mat.mtrl-sci]
A.P. Hurford, J.J. Harou, L. Bonzanigo, P.A. Ray, P. Karki, L. Bharati, P. Chinnasamy (2020), Efficient and robust hydropower system design under uncertainty – A demonstration in Nepal, Renewable and Sustainable Energy Reviews, doi: 10.1016/j.rser.2020.109910
Hussain Ismat, Karim (2020), Cardiorespiratory Fitness and Virtual Navigation in Healthy Older Adults, Boston University Doctoral Dissertation, https://search.proquest.com/openview/9977101002865b899b724f70829b0f53
Benjamin D. Johnsson et al (2020), A Diffuse Metal-Poor Component of the Sagittarius Stream Revealed by the H3 Survey, arXiv:2007.14408, [astro-ph.GA]
Jou, Christine (2020.), Connecting Language Representations in
Humans and Machines, Bachelor’s thesis, Harvard College, https://nrs.harvard.edu/URN-3:HUL.INSTREPOS:37364734

Malcolm N. Mistry (2020), A High Spatiotemporal Resolution Global Gridded Dataset of Historical Human Discomfort Indices, Atmosphere, doi: 10.3390/atmos11080835
M. Mohebujjaman et al (2020), Scalability Analysis of Direct and Iterative Solvers Used to Model Charging of Non-insulated Superconducting Pancake Solenoids, arXiv: 2007.15410 [physics.comp-ph],
T. Odstrčil, N. T. Howard,  F. Sciortino,  C. Chrystal, C. Holland,  E. Hollmann,  G. McKee,  K. E. Thome, and  T. M. Wilks (2020), Dependence of the impurity transport on the dominant turbulent regime in ELM-y H-mode discharges on the DIII-D tokamak, Physics of Plasmas, doi: 10.1063/5.0010725
Monica Pengshung, Jingbai Li, Fatemah Mukadum, Steven A. Lopez, and Ellen M. Sletten(2020), Photophysical Tuning of Shortwave Infrared Flavylium Heptamethine Dyes via Substituent Placement, ACS Organic (Chemistry) Letters, doi: 10.1021/acs.orglett.0c02213
Rami V. Tabri and Christopher D. Walker (2020), Inference for Moment Inequalities: A Constrained Moment Selection Procedure, arXiv:  2008.09021 [econ.EM]
Pim van der Hoorn, William J. Cunningham, Gabor Lippner, Carlo Trugenberger, and Dmitri Krioukov (2020), Ollivier-Ricci curvature convergence in random geometric graphs, arXiv: 2008.01209 [math.PR]
Dorien Villafranco, Ankush Gupta, Emily Ryan, R. Glynn Holt, Sheryl M. Grace (2020), An Assessment of Homogeneous Mixture Method Cavitation Models in Predicting Cavitation in Nozzle Flow, Journal of Fluids Engineering, doi: 10.1115/1.4048287
V, Ashley Villar et al (2020), SuperRAENN: A Semi-supervised Supernova Photometric Classification Pipeline Trained on Pan-STARRS1 Medium Deep Survey Supernovae, arXiv: 2008.04921 [astro-ph.HE]
Krissia Zawadzki, Luhang Yang, and Adrian E. Feiguin (2020), Beyond perturbation theory: A time-dependent approach to inelastic scattering spectroscopies in- and away from equilibrium, arXiv: 2008.09709 [cond-mat-str-el]
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact

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MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute – Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer – Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) – a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer’s Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
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