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January 2023 Publications

January 31, 2023

Aviation lightning prevention? ​Numerical-relativity-informed perturbation
theory​?​ Probabilistic genotype-phenotype mapping?
This month’s selection of publications featuring research using the MGHPCC.

Chen, Zhao and Nan Wang (2023), Learning dynamics from coarse/noisy data with scalable symbolic regression, Mechanical Systems and Signal Processing, doi: 10.1016/j.ymssp.2023.110147

Cone, Cooper et al (2023), Deep Reinforcement Learning Reward Model Parameter Optimization with Surrogate Modelling, Aerospace Research Central, doi: 10.2514/6.2023-2155

Dougherty, Maureen et al (2022), The ERN Cryo-EM Federated Instrument Pilot Project: Phase 1,
IEEE 2022 4th Annual Workshop on Extreme-scale Experiment-in-the-Loop Computing (XLOOP), 
doi: 10.1109/XLOOP56614.2022.00009

Fernandez, John E. et al (2023), Comparison of F-76 and JP-8 Fuel Surrogates in a Low-Pressure Swirl Burner, Aerospace Research Center, doi: 10.2514/6.2023-0782

Guerra-Garcia, Carmen et al (2023), Addressing the Lightning Protection Needs of Novel Aircraft, Aerospace Research Central, doi: 10.2514/6.2023-2618

Husseini, Jamal et al (2023), Generation of 2-D Fiber Reinforced Composite Microstructures with Statistically Equivalent Features Using Machine Learning and Adaptive Data Generation, Aerospace Research Center, doi: 10.2514/6.2023-1267

Islam, Jousif et al (2023), Remnant black hole properties from numerical-relativity-informed perturbation theory and implications for waveform modelling, arXiv: 2301.07251 [gr-qc]

Islam, Rajibul et al (2022), Switchable large-gap quantum spin Hall state in the two-dimensional MSi2Z4 class of materials, Physical Review B, doi: 10.1103/PhysRevB.106.245149

Jain, Aastha et al (2023), Regulation of Ebola GP conformation and membrane binding by the chemical environment of the late endosome, biorXiv, doi: 10.1101/2023.01.18.524651

Lee, Sanghun et al (2023), A comparison between similarity matrices for principal component analysis to assess population stratification in sequenced genetic data sets Get access Arrow, Briefings on Bioinformatics, doi: 10.1093/bib/bbac611

Matlock, Alex et al (2023), Multiple-scattering simulator-trained neural network for intensity diffraction tomography, Optics Express, doi: 10.1364/OE.477396

Mazzola, Frederico et al (2023), Discovery of a Magnetic Dirac System with a Large Intrinsic Nonlinear Hall Effect, Nano. Lett., doi: 10.1021/acs.nanolett.2c04194

Milstein, Adam B et al (2023), Detail Enhancement of AIRS/AMSU Temperature and Moisture Profiles Using a 3D Deep Neural Network, Artificial Intelligence for the Earth Systems, doi: 10.1175/AIES-D-22-0037.1

Pavan, Colin A. et al (2023), Modeling Flame Speed Modification by Nanosecond Pulsed Discharges to Inform Experimental Design, Aerospace Research Center, doi: 10.2514/6.2023-2056

Podolak, M. et al (2023), An equation of state of CO for use in planetary modeling, Icarus, doi: 10.1016/j.icarus.2023.115424

Sappington, Anna and Vaibhav Mohanty (2023), Probabilistic Genotype-Phenotype Maps Reveal Mutational Robustness of RNA Folding, Spin Glasses, and Quantum Circuits, arXiv: 2301.01847 [cond-mat.stat-mech]

Schiefelbein, M.C. et al (2023), Automated Contact Tracing Assessment, LL Technical Report 

Starko, S. et al (2023), Marine heatwaves threaten cryptic coral diversity and erode 2 associations amongst coevolving partners, bioRxiv, doi: 10.1101/2023.01.07.522953

Teng, Yanting et al (2023), Classifying topological neural network quantum states via diffusion maps, 
arXiv: 2301.02683 [quant-ph] 

Volkov, Victor V. et al (2023), Raman microscopy tracks maturity of melanin intermediates in Botrytis cinerea, a plant pathogen, RSC Advances, doi: 10.1039/D2RA06439A

Vuong, Van-Quan and Qiang Cui (2023), Reparameterization of the Chemical-Potential Equalization Model with DFTB3: A Practical Balance Between Accuracy and Transferability, The Journal of Chemical Physics, doi: 10.1063/5.0132903

Wolf, Lawrence and Walter Thiel (2022), Computational Investigations into the Mechanisms of Trans-Selective Hydrogenation and Hydrometalation of Alkynes, Organometallics, doi: 10.1021/bk-2019-1317.ch003

Yahyavi, Mohammad et al (2023), Transverse circular photogalvanic effect associated with Lorentz-violating Weyl fermions, arXiv: 2301.00958

Yang, Xian P. et al (2023), Coexistence of bulk-nodal and surface-nodeless Cooper pairings in a superconducting Dirac semimetal, arXiv: 2301.01402

Zhu, Yanglin et al (2023), Surprisingly large anomalous Hall effect and giant negative magnetoresistance in half topological semimetals, arXiv: 2301.01704

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute – Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer – Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) – a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer’s Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
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