Menu

May Publications

June 3, 2019

Below is a selection of papers that appeared in May 2019 reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey Cluster, Northeastern’s Discovery Cluster, and the Boston University Shared Computing Cluster all of which are housed at the MGHPCC.
Asanga Bandara, Afra Panahi, George A. Pantelopulos, Tetsuro Nagai, and John E. Straub (2019), Exploring the impact of proteins on the line tension of a phase-separating ternary lipid mixture, The Journal of Chemical Physics, doi: 10.1063/1.5091450
Ligia R. Benavides, Julia G. Cosgrove, Mark S. Harvey, Gonzalo Giribet (2019), Phylogenomic interrogation resolves the backbone of the Pseudoscorpiones Tree of Life, Molecular Phylogenetics and Evolution, doi: 10.1016/j.ympev.2019.05.023
Pak‐Wah Chan, Pedram Hassanzadeh, Zhiming Kuang (2019), Evaluating Indices of Blocking Anticyclones in Terms of Their Linear Relations With Surface Hot Extremes, Geophysical Research Letters, doi: 10.1029/2019GL083307
Sarah C. Conner, Lisa M. Sullivan, Emelia J. Benjamin, Michael P. LaValley, Sandro Galea, Ludovic Trinquart (2019), Adjusted restricted mean survival times in observational studies, Statistics in Medicine, doi: 10.1002/sim.8206
Feng Ding and Robin D. Wordsworth (2019), A New Line-by-line General Circulation Model for Simulations of Diverse Planetary Atmospheres: Initial Validation and Application to Exoplanet GJ 1132B, arXiv: 1905.04635 [astro-ph.EP]
William Fitzhugh, Fan Wu, Luhan Ye, Wenye Deng, Pengfei Qi, Xin Li (2019), A High‐Throughput Search for Functionally Stable Interfaces in Sulfide Solid‐State Lithium Ion Conductors, Advanced Energy Materials, doi: 10.1002/aenm.201900807
Barak Gabai, Xi Yin (2019), On The S-Matrix of Ising Field Theory in Two Dimensions, arXiv: 1905.00710 [hep-th]
Brandt A.L. Gaches, Stella S.R. Offner, Thomas G. Bisbas (2019), The Astrochemical Impact of Cosmic Rays in Protoclusters I: Molecular Cloud Chemistry, arXiv: 1905.02232 [astro-ph.GA]
Gregory M. Green, Edward Schlafly, Catherine Zucker, Joshua S Speagle, Douglas Finkbeiner (2019), A 3D Dust Map Based on Gaia, Pan-STARRS 1 and 2MASS, arXiv: 1905.02734 [astro-ph.GA]
Jonathan I. Leckenby, Miranda A. Chacon, Adriaan O. Grobbelaar, Jeff W. Lichtman (2019), Imaging Peripheral Nerve Regeneration: A New Technique for 3D Visualization of Axonal Behavior, Journal of Surgical Research, doi: 10.1016/j.jss.2019.04.046
Xinzhi Li, Amit Das, Dapeng Bi (2019), Mechanical heterogeneity in tissues promotes rigidity and controls cellular invasion, arXiv: 1905.02697 [physics.bio-ph]
Austin Thai and Sheryl M. Grace (2019), Prediction of small quadrotor blade induced noise, 25th AIAA/CEAS Aeroacoustics Conference, 20-23 May, 2019, Delft, The Netherlands, doi: 10.2514/6.2019-2684
Thomas L. Williams, Steven A. Lopez, Leila F. Deravi (2019), A Sustainable Route To Synthesize the Xanthommatin Biochrome via an Electro-catalyzed Oxidation of Tryptophan Metabolites, ACS Sustainable Chem. Eng., doi: 10.1021/acssuschemeng.9b01144
Xiao Wu, Yi Xu, Bradley P. Carlin (2019), Optimizing Interim Analysis Timing for Bayesian Adaptive Commensurate Designs, arXiv: 1905.07456 [stat.AP]
Phelan Yu, Lawrence W. Cheuk, Ivan Kozyryev, and John M. Doyle (2019), A Scalable Quantum Computing Platform Using Symmetric-Top Molecules, arXiv: 1905.06439 [physics.atom-ph]
Krissia Zawadzki and Adrian E. Feiguin (2019), Time and momentum-resolved tunneling spectroscopy of pump-driven non-thermal excitations in Mott insulators, arXiv: 1905.08166 [cond-mat.str-el]
Jiawei Zhuang, Daniel J. Jacob, Judit Flo Gaya, Robert M. Yantosca, Elizabeth W. Lundgren, Melissa P. Sulprizio, Sebastian D. Eastham (2019), Enabling immediate access to Earth science models through cloud computing: application to the GEOS-Chem model, Bulletin of the American Meteorological Society, doi: 10.1175/BAMS-D-18-0243.1
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

Links

MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute – Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer – Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) – a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer’s Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
All Research Projects

Collaborative projects

ALL Collaborative PROJECTS

Outreach & Education Projects

See ALL Scholarships
100 Bigelow Street, Holyoke, MA 01040