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May Publications

June 2, 2020

Below is a selection of papers that appeared in May 2020  reporting the results of research using the Massachusetts Green High Performance Computing Center (MGHPCC), or acknowledging the use of Harvard’s Odyssey or Cannon Clusters, Northeastern’s Discovery Cluster, the Boston University Shared Computing Cluster and MIT’s Engaging Cluster all of which are housed at the MGHPCC.
Wenyu Chen and Rahul Mazumder (2020), Multivariate Convex Regression at Scale, arXiv:2005.11588 [math.OC]
Arielle Cohen, D. Kirk Lewis, Tianlun Huang, Sahar Sharifzadeh (2020), Localized Excitons in Defective Monolayer Germanium Selenide, arXiv:2005.10102 [cond-mat.mtrl-sci]
Ofer Cohen, C. Garraffo, Sofia-Paraskevi Moschou, Jeremy J. Drake, J. D. Alvarado-Gomez, Alex Glocer, and Federico Fraschetti (2020), The Space Environment and Atmospheric Joule Heating of the Habitable Zone Exoplanet TOI700-d, arXiv:2005.11587 [astro-ph.SR]
Earnest, Rebecca; Rönn, Minttu M.; Bellerose, Meghan Gift, Thomas L.; Berruti, Andrés A.; Hsu, Katherine K. ; Testa, Christian; Zhu, Lin ; Malyuta, Yelena; Menzies, Nicolas A.; Salomon, Joshua A. (2020) Population-Level Benefits of Extragenital Gonorrhea Screening among Men Who Have Sex with Men, Sexually Transmitted Diseases, doi: 10.1097/OLQ.0000000000001189
Sam Hadden and Matthew J. Payne (2020), Modeling Radial Velocity Data of Resonant Planets to Infer Migration Histories, arXiv:2005.03034 [astro-ph.EP]
Yiwen Huang, Carl-Johan Haster, Salvatore Vitale, Vijay Varma, Francois Foucart, and Sylvia Biscoveanu (2020), Statistical and systematic uncertainties in extracting the source properties of neutron star – black hole binaries with gravitational waves, arXiv: 2005:11850 [gr-qc]
Zhiguang Jia, Jeremy D. Schmit, and Jianhan Chen (2020), Amyloid assembly is dominated by misregistered kinetic traps on an unbiased energy landscape, PNAS, doi: 10.1073/pnas.1911153117
Yuyu Li, Khwanchai Tantiwanichapan, Anna K. Swan and Roberto Paiella (2020), Graphene plasmonic devices for terahertz optoelectronics, Nanophotonics, doi: 10.1515/nanoph-2020-0211
Jiaqi Lin, Lei Miao, Grace Zhong, Chih-Hsin Lin, Roozbeh Dargazangy & Alfredo Alexander-Katz (2020), Understanding the synergistic effect of physicochemical properties of nanoparticles and their cellular entry pathways, Communications Biology., doi: 10.1038/s42003-020-0917-1
Jeffrey Z. Pan and Nicholas Zufelt (2020), On Intrinsic Dataset Properties for Adversarial Machine Learning, arXiv: 2005.0917 [cs.LG]
Yangzhong Qin, Christoph Schnedermann, Mariusz Tasior, Daniel T. Gryko, and Daniel G. Nocera (2020), Direct Observation of Different One- and Two-Photon Fluorescent States in a Pyrrolo[3,2‐b]pyrrole Fluorophor, J. Phys. Chem. Lett. , doi: 10.1021/acs.jpclett.0c00669
Loïc M. Roch, Semion K. Saikin, Florian Häse, Pascal Friederich, Randall H. Goldsmith, Salvador León, and Alán Aspuru-Guzik (2020), From Absorption Spectra to Charge Transfer in Nanoaggregates of Oligomers with Machine Learning, ACS Nano, doi: 10.1021/acsnano.0c00384
Bowen Zhao, Jun Takahashi, and Anders W. Sandvik1 (2020), Multicritical deconfined quantum-criticality and Lifshitz point of a helical valence-bond phase, arXiv:2005:10184 [cond-mat.str.el]
Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute – Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer – Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) – a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer’s Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
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