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Pioneering a Return to the Pioneer Valley

February 20, 2013

Story by Helen Hill for MGHPCC News
The operating model for MGHPCC is as a specialized landlord for computers from the 5 partner universities. The building provides state of the art facilities to house, power, climate-control and connect, tailored to the needs of big data users on different campuses. With the ribbon cutting behind us MGHPCC is in the process of welcoming its first tenant, among them the BU IT team.


 

In January I tagged along as a team from BU's IT group were working on the center's first installation.
When I arrived the four person crew were just beginning to unpack the DELL computers. Two more people would join them from the networking group. The racks to house the computers had been brought down to the "Staging" room, a handy workshop for installations, prior to taking them upstairs to the computer room to be incorporated into their pod. The lighting is great, there's plenty of room (nobody else's delicate equipment to damage) and it's a comfortable working temperature. It also has an electrified twin of a pod's overhead cable system to allow connections to be tested before final installation. There's even a handy tool box standing ready.

"It's fantastic to see this new off-campus building in Holyoke start to be put to use. The whole BU team has done a fabulous job in getting us to this point" - Andrei E Ruckenstein, Vice President and Associate Provost of Research , Boston University.

In this round the BU team were installing 64 compute nodes with 16 cores each for a total of 1024 cores, as well as a dozen or so additional computers which will provide various services (e.g. login servers, file servers, management servers). This first installation is all new equipment. The new compute nodes are Dell C8000 with dual Sandy-Bridge processors using a variety of network interconnects, FDR InfiniBand, 10 GigE and plain old GigE. The storage is based on IBM's GPFS parallel file system and Dell disk arrays.
In the coming months the team will also be moving a few thousand additional cores from existing on-campus clusters to the MGHPCC.
Like all of the other member universities, BU has a 10 Gb/s ring from Holyoke to their campus. Over time they will migrate data for their existing storage arrays to the new facility. The recent installation includes about 0.5 PB of storage.
BU, along with Harvard, operates one of the three so-called Tier 2 Centers in the U.S. for the ATLAS project. ATLAS is one of the two large detectors at the Large Hadron Collider (LHC) at CERN. As you likely saw in the news several months back, both LHC experiments, ATLAS and CMS, reported evidence of detection of the Higgs boson. The data from the LHC is distributed to the Tier 2 and Tier 3 centers for analysis and it was this analysis that lead to the discovery.
The Tier 2 computing at BU comprises a dozen racks of compute and storage. These will be moving to the MGHPCC at the end of March.
BU has over 500 users from dozens of departments across the university. The disciplines using BU's computing facilities include not only the usual suspects in the physical sciences, but also such diverse fields as music, theology and anthropology. The new computational facilities at the MGHPCC will also be supporting the computational needs from their Medical campus.
Once the systems are stabilized the team will put out a call for "Friendly Users" from their existing community to start testing their codes in the new environment.

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
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