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Evolution of Viral Infectious Disease

The VirusPlus Lab at UMASS Boston uses the UMASS Unity Cluster in its studies of host-pathogen dynamics of viral infectious diseases including SARS-CoV-2/COVID19, Influenza A virus, Morbilliviruses and Paramyxoviruses. Understanding transmission dynamics that link humans and animals is key to pandemic preparedness.

Work in the lab focuses on monitoring human-animal interactions where rapidly evolving viruses emerge. Virus spillover is a complex process involving multiple factors, and cross-species transmission has not been fully studied in natural environments. Lab members conduct global research, including in North America (Massachusetts and Alaska), Eurasia, and Africa.

Hypotheses about spillover mechanisms the team is investigating include::

  • Transmission is highest among closely related species (e.g., human-to-human or duck-to-guinea fowl) and occurs slowly due to mutations.
  • Agricultural practices may trigger larger, less frequent species jumps due to faster evolutionary changes like reassortment or recombination.
  • People with frequent animal contact are at higher risk, especially if they have no prior immunity.
  • Previous exposure to animal viruses offers protection if the new virus is similar, but infection occurs if there's a big difference in viral strains.
  • This research helps us understand influenza drivers in natural settings and informs experiments on emerging strains to assess pandemic potential.

The lab’s approach includes rapid genotyping of viruses during outbreaks to track their emergence, transmission, and spread in host populations. This data can then be used to guide public health responses and develop diagnostics and treatments. Their virus analysis pipeline includes phylogenetic studies, identifying mutations for human adaptation, and testing virus replication in human nasal cells and antiviral drug sensitivity.

Nichola Hill
Assistant Professor of Biology, UMass Boston

Research projects

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Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
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