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September Publications

October 5, 2022

Parallel Python Programming? Bimetallic Catalysts? Chiral N-Tethered 1,7-Enynes? This month's selection of publications featuring research using the MGHPCC.

Angus Beane et al (2022), Stellar Bars in Isolated Gas-Rich Spiral Galaxies Do Not Slow Down, arXiv: 2209.03364 [astro-ph.GA]

Ligia R. Benavides, Gregory D. Edgecombe, Gonzalo Giribet (2022), Re-evaluating and dating myriapod diversification with phylotranscriptomics under a regime of dense taxon sampling, Molecular Phylogenetics and Evolution, doi: 10.1016/j.ympev.2022.107621

Chansup Byun et al (2022), pPython for Parallel Python Programming, arXiv: 2208.14908

Helena Calatrava et al (2022), Cooperative Positioning using Massive Differentiation of GNSS Pseudorange Measurements, Masters Dissertation, Universitat Politècnica de Catalunya

Chan, P.W., Catto, J.L. & Collins, M. (2022), Heatwave–blocking relation change likely dominates over decrease in blocking frequency under global warming, npj Clim Atmos Sci, doi: 10.1038/s41612-022-00290-2

Chi-Ming Chang and Ying-Hsuan Lin (2022), Words to describe a black hole, arXiv: 2209.06728 [hep-th]

Zhou Chen (2022), Surface Science Study of Bimetallic Catalysts and Confined Chemistry with 2-Dimensional Model System, Doctoral Dissertation Stony Brook University, ProQuest

Yu Cheng et al (2022), Logarithmic profiles of velocity in stably stratified atmospheric boundary layers, arXiv: 2209.07008 [physics.flu-dyn]

Jorge Escorihuela and Lawrence M. Wolf (2022), Computational Study on the Co-Mediated Intramolecular Pauson–Khand Reaction of Fluorinated and Chiral N-Tethered 1,7-Enynes, Organometallics, doi: 10.1021/acs.organomet.2c00227

Dirk Ifenthaler et al (2022), Investigating students' use of self-assessments in higher education using learning analytics, Journal of Computer Assisted Learning, doi: 10.1111/jcal.12744

Hongyu Li et al (2022), StereoVoxelNet: Real-Time Obstacle Detection Based on Occupancy Voxels from a Stereo Camera Using Deep Neural Networks, arXiv: 2209.08459 [cs.RO] https://arxiv.org/pdf/2209.08459.pdf

Deng Li, Mona S. Minkara (2022), Elucidating the enhanced binding affinity of a double mutant SP-D with trimannose on the influenza A virus using molecular dynamics, Science Direct, doi: 10.1016/j.csbj.2022.08.045

Sen-Hui Liu et al (2022), A review and progress of multiphase flows in atmospheric and low pressure plasma spray advanced coating, Science Direct, doi: 10.1016/j.mtphys.2022.100832

Menkir, T.F., and Donnelly, C.A. (2022), The impact of repeated rapid test strategies on the effectiveness of at-home antiviral treatments for SARS-CoV-2, Nat Commun, doi: 10.1038/s41467-022-32640-2

Prajwal Niraula et al (2022), The Impending Opacity Challenge in Exoplanet Atmospheric Characterization, arXiv: 2209.07464 [astro-ph.EP]

Alexander E. Siemenn et al (2022), Fast Bayesian Optimization of Needle-in-a-Haystack Problems using Zooming Memory -based Initialization, arXiv: 2208.13771 [cs.LG]

Hao Tang et al (2022), Communication-efficient Quantum Algorithm for Distributed Machine Learning, arXiv:2209.04888 [quant-ph]

Jonathan Vandermause et al (2022), Active learning of reactive Bayesian force fields applied to heterogeneous catalysis dynamics of H/Pt, Nature Communications, doi: 10.1038/s41467-022-32294-0

Matthew L. Weiss et al (2022), An Evaluation of Low Overhead Time Series Preprocessing Techniques for Downstream Machine Learning, arXiv: 2209.05300 [cs.LG]

Jack Wisdom et al (2022), Loss of a satellite could explain Saturn’s obliquity and young rings, Science, doi: 10.1126/science.abn1234

Yuanhao Wu et al (2022), N-DISE: NDN-based data distribution for large-scale data-intensive science, ICN '22: Proceedings of the 9th ACM Conference on Information-Centric Networking, doi: 10.1145/3517212.3558087

Shu Zhao et al (2022), Genomic and Molecular Identification of Genes Contributing to the Caspofungin Paradoxical Effect in Aspergillus fumigatus, Microbiology Spectrum, doi: 10.1128/spectrum.00519-22

Yuanchao Zheng et al (2022), An evaluation of the genome-wide false positive rates of common methods for identifying differentially methylated regions using illumina methylation arrays, Epigenetics, doi: 10.1080/15592294.2022.2115600

Zikai Xiong and Robert M. Freund (2022), Using Taylor-approximated Gradients to Improve the Frank-Wolfe Method for Empirical Risk Minimization, arXiv: 2208.13933 [cs.LG]

Yujia Xue et al (2022), Deep-learning-augmented computational miniature mesoscope, Optica, doi: 10.1364/OPTICA.464700

Ziyan Zhu, Stephen Carr, Qiong Ma, and Efthimios Kaxiras (2022), Electric field-tunable layer polarization in graphene/boron nitride twisted quadrilayer superlattices, arXiv: 2209.10636 [cond-mat.mes-hall]

Do you have news about research using computing resources at the MGHPCC? If you have an interesting project that you want to tell people about or a paper you would like listed, contact 

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MGHPCC Publications

Research projects

A Future of Unmanned Aerial Vehicles
Yale Budget Lab
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
Towards a Whole Brain Cellular Atlas
Tornado Path Detection
The Kempner Institute - Unlocking Intelligence
The Institute for Experiential AI
Taming the Energy Appetite of AI Models
Surface Behavior
Studying Highly Efficient Biological Solar Energy Systems
Software for Unreliable Quantum Computers
Simulating Large Biomolecular Assemblies
SEQer - Sequence Evaluation in Realtime
Revolutionizing Materials Design with Computational Modeling
Remote Sensing of Earth Systems
QuEra at the MGHPCC
Quantum Computing in Renewable Energy Development
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
New Insights on Binary Black Holes
NeuraChip
Network Attached FPGAs in the OCT
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
Modeling Hydrogels and Elastomers
Modeling Breast Cancer Spread
Measuring Neutrino Mass
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
Impact of Marine Heatwaves on Coral Diversity
IceCube: Hunting Neutrinos
Genome Forecasting
Global Consequences of Warming-Induced Arctic River Changes
Fuzzing the Linux Kernel
Exact Gravitational Lensing by Rotating Black Holes
Evolution of Viral Infectious Disease
Evaluating Health Benefits of Stricter US Air Quality Standards
Ephemeral Stream Water Contributions to US Drainage Networks
Energy Transport and Ultrafast Spectroscopy Lab
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Discovering Evolution’s Master Switches
Dexterous Robotic Hands
Developing Advanced Materials for a Sustainable Energy Future
Detecting Protein Concentrations in Assays
Denser Environments Cultivate Larger Galaxies
Deciphering Alzheimer's Disease
Dancing Frog Genomes
Cyber-Physical Communication Network Security
Avoiding Smash Hits
Analyzing the Gut Microbiome
Adaptive Deep Learning Systems Towards Edge Intelligence
Accelerating Rendering Power
ACAS X: A Family of Next-Generation Collision Avoidance Systems
Neurocognition at the Wu Tsai Institute, Yale
Computational Modeling of Biological Systems
Computational Molecular Ecology
Social Capital and Economic Mobility
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