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March 2025 Publications

April 3, 2025

Tunable superconductivity? Hydrogen deployment in net-zero energy systems? Environmental drivers of spatial variation in tropical forest canopy height? A selection of recent publications featuring research using the MGHPCC.

Atherton, Kathryn et al (2025), Dysbiosis in the urban tree microbiome, via ResearchSquare, doi: 10.21203/rs.3.rs-5939048/v1 

Bacik, Karol A. et al (2025), Order–disorder transition in multidirectional crowds, PNAS, doi: 10.1073/pnas.2420697122 

Baek, S.G. et al (2025), Modeling study of synergistic effects between lower hybrid and electron cyclotron current drive on EAST, Nucl. Fusion, doi: 10.1088/1741-4326/adc287

Byju, Sandra (2025), Quantifying the Dynamics and Functional Relationships of Collective Processes in a Biomolecular Assembly, Northeastern University ProQuest Dissertations & Theses,  2025, 31843008

Chakraborty, Srirupa et al (2025), Allosteric Control and Glycan Shielding Adaptations in the SARS-CoV-2 Spike from Early to Peak Virulence, via biorXiv, doi: 10.1101/2025.03.11.642723 

Dabringhaus, P. et al (2025), Dicationic Boron Derivatives of Schlenk’s and Thiele’s Hydrocarbon, Journal of the American Chemical Society, doi: 10.1021/jacs.5c00236

Eiskowitz, Skylar et al (2025), Revenue Management to Maximize Global Network Revenue for a Satellite Communication Operator, Intl. Journal of Satellite Communications and Networking, doi: 10.1002/sat.1562

Faggioli, Guglielmo et al (2025), Testing eccentric corrections to the radiation-reaction force in the test-mass limit of effective-one-body models, Physical Review D, doi: 10.1103/PhysRevD.111.044036

Hendricks, Lauren et al (2025), Fontimonas thermophila Alkane Monooxygenase (FtAlkB) Is an Alkyl Fluoride Dehalogenase, Journal of the American Chemical Society, doi: 10.1021/jacs.5c00386

Hossain, M.S., Zhang, Q., Graf, D. et al (2025), Tunable superconductivity coexisting with the anomalous Hall effect in a transition metal dichalcogenide, Nat Commun, doi: 10.1038/s41467-025-56919-2 

Keys AM, Kastner DW, Kiessling LL, Kulik HJ (2025), CH-pi Interactions Confer Orientational Flexibility in Protein-Carbohydrate Binding Sites, ChemRxiv, doi: 10.26434/chemrxiv-2025-5n9m1 

Law, Jun Wen et al (2025), Role of Technology Flexibility and Grid Coupling on Hydrogen Deployment in Net-Zero Energy Systems, Environmental Science and Technology, doi: 10.1021/acs.est.4c12166 

Li, H., Bao, S., Farzad, N. et al (2025), Spatially resolved genome-wide joint profiling of epigenome and transcriptome with spatial-ATAC-RNA-seq and spatial-CUT&Tag-RNA-seq, Nat Protoc, doi: 10.1038/s41596-025-01145-9

Liu, Shaoqing et al (2025), Environmental drivers of spatial variation in tropical forest canopy height: Insights from NASA’s GEDI spaceborne LiDAR, PNAS, doi: 10.1073/pnas.240175512

Mani, Natesan et al (2025), Cleaved vs. Uncleaved: How Furin Cleavage Reshapes the Conformational Landscape of SARS-CoV-2 Spike, via bioRxiv, doi: 10.1101/2025.03.12.642945

Pierce M.W. et al (2025), Features of double-frequency triad interactions in the nonlinear response to a moving load on a floating ice sheet, Journal of Fluid Mechanics, doi: 10.1017/jfm.2025.89

Ramachandran, Balajee et al (2025), Velcro-binding by cardiac troponin-I traps tropomyosin on actin in a low-energy relaxed state, Biochemical and Biophysical Research Communications, doi: 10.1016/j.bbrc.2025.151595 

Routh, Prahlad K. et al (2025), Unraveling the Kinetics of Hydride Formation and Decomposition at Pd–Au Bimetallic Interfaces: A Combined Spectroscopic and Computational Study, J. Am. Chem. Soc, doi: 10.1021/jacs.5c00842 

Tong Ye, Cassandra et al (2025), Learned, uncertainty-driven adaptive acquisition for photon-efficient scanning microscopy, Opt. Express, doi: 10.1364/OE.542640

Wang, Nathan B, et al (2025), Compact transcription factor cassettes generate functional, engraftable motor neurons by direct conversion, Cell Systems, doi: 10.1016/j.cels.2025.101206 

Yook, S., Solomon, S., & Wang, X. (2025), The impact of 2022 hunga tonga‐hunga ha'apai (hunga) eruption on stratospheric circulation and climate, Journal of Geophysical Research:
Atmospheres, doi: 10.1029/2024JD042943 

Yu, Hyejin et al (2025), Molecular Level Understanding of Polyethylene Terephthalate (PET) Depolymerization in Base/Alcohol Hybrid Systems, ACS Appl. Mater. Interfaces, doi: 10.1021/acsami.4c20887 

Yu, Sunmoon et al (2025), Reactivating Molecular Cobalt Catalysts for Electrochemical CO2 Conversion to Methanol, J. Am. Chem. Soc., doi: 10.1021/jacs.5c02411

​Jiang, Y. and H. Zhang (2025), Empowering genome-wide association studies via a visualizable test based on the regional association score, PNAS, doi: 10.1073/pnas.2419721122 

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Accelerating Rendering Power
Sailing the Symbiosis Seascape
Discovering Evolution’s Master Switches
Evaluating Health Benefits of Stricter US Air Quality Standards
Naval and Ocean Renewable Energy Hydrodynamics
Revolutionizing Materials Design with Computational Modeling
Simulating Large Biomolecular Assemblies
How Monkeys - and Machines - See in 3D
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